PoplarV1, Main, Exploration, bibRecord, 004035

Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert.

Identifieur interne : 004035 ( Main/Exploration ); précédent : 004034; suivant : 004036

Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert.

Auteurs : Mikael Brosché [Finlande] ; Basia Vinocur ; Edward R. Alatalo ; Airi Lamminm Ki ; Thomas Teichmann ; Eric A. Ottow ; Dimitar Djilianov ; Dany Afif ; Marie-Béatrice Bogeat-Triboulot ; Arie Altman ; Andrea Polle ; Erwin Dreyer ; Stephen Rudd ; Lars Paulin ; Petri Auvinen ; Jaakko Kangasj Rvi

Source :

Genome biology [ 1474-760X ] ; 2005.

RBID : pubmed:16356264

Descripteurs français

KwdFr :
- ARN messager (génétique), ARN messager (métabolisme), Analyse de profil d'expression de gènes (MeSH), Arbres (croissance et développement), Arbres (métabolisme), Banque de gènes (MeSH), Catastrophes (MeSH), Chlorure de sodium (MeSH), Climat désertique (MeSH), Feuilles de plante (composition chimique), Gènes de plante (génétique), Génome végétal (génétique), Israël (MeSH), Populus (classification), Populus (génétique), Populus (métabolisme), RT-PCR (MeSH), Régulation de l'expression des gènes végétaux (MeSH), Séquençage par oligonucléotides en batterie (MeSH), Étiquettes de séquences exprimées (MeSH).
MESH :
- composition chimique : Feuilles de plante, Populus.
- croissance et développement : Arbres.
- génétique : ARN messager, Gènes de plante, Génome végétal, Populus.
- métabolisme : ARN messager, Arbres, Populus.
- Analyse de profil d'expression de gènes, Banque de gènes, Catastrophes, Chlorure de sodium, Climat désertique, Israël, RT-PCR, Régulation de l'expression des gènes végétaux, Séquençage par oligonucléotides en batterie, Étiquettes de séquences exprimées.
Wicri :
- geographic : Israël.

English descriptors

KwdEn :
- Desert Climate (MeSH), Disasters (MeSH), Expressed Sequence Tags (MeSH), Gene Expression Profiling (MeSH), Gene Expression Regulation, Plant (MeSH), Gene Library (MeSH), Genes, Plant (genetics), Genome, Plant (genetics), Israel (MeSH), Oligonucleotide Array Sequence Analysis (MeSH), Plant Leaves (chemistry), Populus (classification), Populus (genetics), Populus (metabolism), RNA, Messenger (genetics), RNA, Messenger (metabolism), Reverse Transcriptase Polymerase Chain Reaction (MeSH), Sodium Chloride (MeSH), Trees (growth & development), Trees (metabolism).
MESH :
- chemical , genetics : RNA, Messenger.
- chemical , metabolism : RNA, Messenger.
- geographic : Israel, Sodium Chloride.
- chemistry : Plant Leaves.
- classification : Populus.
- genetics : Genes, Plant, Genome, Plant, Populus.
- growth & development : Trees.
- metabolism : Populus, Trees.
- Desert Climate, Disasters, Expressed Sequence Tags, Gene Expression Profiling, Gene Expression Regulation, Plant, Gene Library, Oligonucleotide Array Sequence Analysis, Reverse Transcriptase Polymerase Chain Reaction.

Abstract

BACKGROUND

Plants growing in their natural habitat represent a valuable resource for elucidating mechanisms of acclimation to environmental constraints. Populus euphratica is a salt-tolerant tree species growing in saline semi-arid areas. To identify genes involved in abiotic stress responses under natural conditions we constructed several normalized and subtracted cDNA libraries from control, stress-exposed and desert-grown P. euphratica trees. In addition, we identified several metabolites in desert-grown P. euphratica trees.

RESULTS

About 14,000 expressed sequence tag (EST) sequences were obtained with a good representation of genes putatively involved in resistance and tolerance to salt and other abiotic stresses. A P. euphratica DNA microarray with a uni-gene set of ESTs representing approximately 6,340 different genes was constructed. The microarray was used to study gene expression in adult P. euphratica trees growing in the desert canyon of Ein Avdat in Israel. In parallel, 22 selected metabolites were profiled in the same trees.

CONCLUSION

Of the obtained ESTs, 98% were found in the sequenced P. trichocarpa genome and 74% in other Populus EST collections. This implies that the P. euphratica genome does not contain different genes per se, but that regulation of gene expression might be different and that P. euphratica expresses a different set of genes that contribute to adaptation to saline growth conditions. Also, all of the five measured amino acids show increased levels in trees growing in the more saline soil.

DOI: 10.1186/gb-2005-6-12-r101
PubMed: 16356264
PubMed Central: PMC1414072

Affiliations:

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 003F06
to stream Main, to step Curation: 003F06

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert.</title>
<author><name sortKey="Brosche, Mikael" sort="Brosche, Mikael" uniqKey="Brosche M" first="Mikael" last="Brosché">Mikael Brosché</name>
<affiliation wicri:level="4"><nlm:affiliation>Plant Biology, Department of Biological and Environmental Sciences, University of Helsinki, P,O, Box 65, Viikinkaari 1, FIN-00014 Helsinki, Finland. Mikael.brosche@helsinki.fi</nlm:affiliation>
<country xml:lang="fr">Finlande</country>
<wicri:regionArea>Plant Biology, Department of Biological and Environmental Sciences, University of Helsinki, P,O, Box 65, Viikinkaari 1, FIN-00014 Helsinki</wicri:regionArea>
<orgName type="university">Université d'Helsinki</orgName>
<placeName><settlement type="city">Helsinki</settlement>
<region type="région" nuts="2">Uusimaa</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Vinocur, Basia" sort="Vinocur, Basia" uniqKey="Vinocur B" first="Basia" last="Vinocur">Basia Vinocur</name>
</author>
<author><name sortKey="Alatalo, Edward R" sort="Alatalo, Edward R" uniqKey="Alatalo E" first="Edward R" last="Alatalo">Edward R. Alatalo</name>
</author>
<author><name sortKey="Lamminm Ki, Airi" sort="Lamminm Ki, Airi" uniqKey="Lamminm Ki A" first="Airi" last="Lamminm Ki">Airi Lamminm Ki</name>
</author>
<author><name sortKey="Teichmann, Thomas" sort="Teichmann, Thomas" uniqKey="Teichmann T" first="Thomas" last="Teichmann">Thomas Teichmann</name>
</author>
<author><name sortKey="Ottow, Eric A" sort="Ottow, Eric A" uniqKey="Ottow E" first="Eric A" last="Ottow">Eric A. Ottow</name>
</author>
<author><name sortKey="Djilianov, Dimitar" sort="Djilianov, Dimitar" uniqKey="Djilianov D" first="Dimitar" last="Djilianov">Dimitar Djilianov</name>
</author>
<author><name sortKey="Afif, Dany" sort="Afif, Dany" uniqKey="Afif D" first="Dany" last="Afif">Dany Afif</name>
</author>
<author><name sortKey="Bogeat Triboulot, Marie Beatrice" sort="Bogeat Triboulot, Marie Beatrice" uniqKey="Bogeat Triboulot M" first="Marie-Béatrice" last="Bogeat-Triboulot">Marie-Béatrice Bogeat-Triboulot</name>
</author>
<author><name sortKey="Altman, Arie" sort="Altman, Arie" uniqKey="Altman A" first="Arie" last="Altman">Arie Altman</name>
</author>
<author><name sortKey="Polle, Andrea" sort="Polle, Andrea" uniqKey="Polle A" first="Andrea" last="Polle">Andrea Polle</name>
</author>
<author><name sortKey="Dreyer, Erwin" sort="Dreyer, Erwin" uniqKey="Dreyer E" first="Erwin" last="Dreyer">Erwin Dreyer</name>
</author>
<author><name sortKey="Rudd, Stephen" sort="Rudd, Stephen" uniqKey="Rudd S" first="Stephen" last="Rudd">Stephen Rudd</name>
</author>
<author><name sortKey="Paulin, Lars" sort="Paulin, Lars" uniqKey="Paulin L" first="Lars" last="Paulin">Lars Paulin</name>
</author>
<author><name sortKey="Auvinen, Petri" sort="Auvinen, Petri" uniqKey="Auvinen P" first="Petri" last="Auvinen">Petri Auvinen</name>
</author>
<author><name sortKey="Kangasj Rvi, Jaakko" sort="Kangasj Rvi, Jaakko" uniqKey="Kangasj Rvi J" first="Jaakko" last="Kangasj Rvi">Jaakko Kangasj Rvi</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2005">2005</date>
<idno type="RBID">pubmed:16356264</idno>
<idno type="pmid">16356264</idno>
<idno type="doi">10.1186/gb-2005-6-12-r101</idno>
<idno type="pmc">PMC1414072</idno>
<idno type="wicri:Area/Main/Corpus">003F06</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">003F06</idno>
<idno type="wicri:Area/Main/Curation">003F06</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">003F06</idno>
<idno type="wicri:Area/Main/Exploration">003F06</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert.</title>
<author><name sortKey="Brosche, Mikael" sort="Brosche, Mikael" uniqKey="Brosche M" first="Mikael" last="Brosché">Mikael Brosché</name>
<affiliation wicri:level="4"><nlm:affiliation>Plant Biology, Department of Biological and Environmental Sciences, University of Helsinki, P,O, Box 65, Viikinkaari 1, FIN-00014 Helsinki, Finland. Mikael.brosche@helsinki.fi</nlm:affiliation>
<country xml:lang="fr">Finlande</country>
<wicri:regionArea>Plant Biology, Department of Biological and Environmental Sciences, University of Helsinki, P,O, Box 65, Viikinkaari 1, FIN-00014 Helsinki</wicri:regionArea>
<orgName type="university">Université d'Helsinki</orgName>
<placeName><settlement type="city">Helsinki</settlement>
<region type="région" nuts="2">Uusimaa</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Vinocur, Basia" sort="Vinocur, Basia" uniqKey="Vinocur B" first="Basia" last="Vinocur">Basia Vinocur</name>
</author>
<author><name sortKey="Alatalo, Edward R" sort="Alatalo, Edward R" uniqKey="Alatalo E" first="Edward R" last="Alatalo">Edward R. Alatalo</name>
</author>
<author><name sortKey="Lamminm Ki, Airi" sort="Lamminm Ki, Airi" uniqKey="Lamminm Ki A" first="Airi" last="Lamminm Ki">Airi Lamminm Ki</name>
</author>
<author><name sortKey="Teichmann, Thomas" sort="Teichmann, Thomas" uniqKey="Teichmann T" first="Thomas" last="Teichmann">Thomas Teichmann</name>
</author>
<author><name sortKey="Ottow, Eric A" sort="Ottow, Eric A" uniqKey="Ottow E" first="Eric A" last="Ottow">Eric A. Ottow</name>
</author>
<author><name sortKey="Djilianov, Dimitar" sort="Djilianov, Dimitar" uniqKey="Djilianov D" first="Dimitar" last="Djilianov">Dimitar Djilianov</name>
</author>
<author><name sortKey="Afif, Dany" sort="Afif, Dany" uniqKey="Afif D" first="Dany" last="Afif">Dany Afif</name>
</author>
<author><name sortKey="Bogeat Triboulot, Marie Beatrice" sort="Bogeat Triboulot, Marie Beatrice" uniqKey="Bogeat Triboulot M" first="Marie-Béatrice" last="Bogeat-Triboulot">Marie-Béatrice Bogeat-Triboulot</name>
</author>
<author><name sortKey="Altman, Arie" sort="Altman, Arie" uniqKey="Altman A" first="Arie" last="Altman">Arie Altman</name>
</author>
<author><name sortKey="Polle, Andrea" sort="Polle, Andrea" uniqKey="Polle A" first="Andrea" last="Polle">Andrea Polle</name>
</author>
<author><name sortKey="Dreyer, Erwin" sort="Dreyer, Erwin" uniqKey="Dreyer E" first="Erwin" last="Dreyer">Erwin Dreyer</name>
</author>
<author><name sortKey="Rudd, Stephen" sort="Rudd, Stephen" uniqKey="Rudd S" first="Stephen" last="Rudd">Stephen Rudd</name>
</author>
<author><name sortKey="Paulin, Lars" sort="Paulin, Lars" uniqKey="Paulin L" first="Lars" last="Paulin">Lars Paulin</name>
</author>
<author><name sortKey="Auvinen, Petri" sort="Auvinen, Petri" uniqKey="Auvinen P" first="Petri" last="Auvinen">Petri Auvinen</name>
</author>
<author><name sortKey="Kangasj Rvi, Jaakko" sort="Kangasj Rvi, Jaakko" uniqKey="Kangasj Rvi J" first="Jaakko" last="Kangasj Rvi">Jaakko Kangasj Rvi</name>
</author>
</analytic>
<series><title level="j">Genome biology</title>
<idno type="eISSN">1474-760X</idno>
<imprint><date when="2005" type="published">2005</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Desert Climate (MeSH)</term>
<term>Disasters (MeSH)</term>
<term>Expressed Sequence Tags (MeSH)</term>
<term>Gene Expression Profiling (MeSH)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>Gene Library (MeSH)</term>
<term>Genes, Plant (genetics)</term>
<term>Genome, Plant (genetics)</term>
<term>Israel (MeSH)</term>
<term>Oligonucleotide Array Sequence Analysis (MeSH)</term>
<term>Plant Leaves (chemistry)</term>
<term>Populus (classification)</term>
<term>Populus (genetics)</term>
<term>Populus (metabolism)</term>
<term>RNA, Messenger (genetics)</term>
<term>RNA, Messenger (metabolism)</term>
<term>Reverse Transcriptase Polymerase Chain Reaction (MeSH)</term>
<term>Sodium Chloride (MeSH)</term>
<term>Trees (growth & development)</term>
<term>Trees (metabolism)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ARN messager (génétique)</term>
<term>ARN messager (métabolisme)</term>
<term>Analyse de profil d'expression de gènes (MeSH)</term>
<term>Arbres (croissance et développement)</term>
<term>Arbres (métabolisme)</term>
<term>Banque de gènes (MeSH)</term>
<term>Catastrophes (MeSH)</term>
<term>Chlorure de sodium (MeSH)</term>
<term>Climat désertique (MeSH)</term>
<term>Feuilles de plante (composition chimique)</term>
<term>Gènes de plante (génétique)</term>
<term>Génome végétal (génétique)</term>
<term>Israël (MeSH)</term>
<term>Populus (classification)</term>
<term>Populus (génétique)</term>
<term>Populus (métabolisme)</term>
<term>RT-PCR (MeSH)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Séquençage par oligonucléotides en batterie (MeSH)</term>
<term>Étiquettes de séquences exprimées (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Messenger</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>RNA, Messenger</term>
</keywords>
<keywords scheme="MESH" type="geographic" xml:lang="en"><term>Israel</term>
<term>Sodium Chloride</term>
</keywords>
<keywords scheme="MESH" qualifier="chemistry" xml:lang="en"><term>Plant Leaves</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Feuilles de plante</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Arbres</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Genes, Plant</term>
<term>Genome, Plant</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Trees</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN messager</term>
<term>Gènes de plante</term>
<term>Génome végétal</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Populus</term>
<term>Trees</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>ARN messager</term>
<term>Arbres</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Desert Climate</term>
<term>Disasters</term>
<term>Expressed Sequence Tags</term>
<term>Gene Expression Profiling</term>
<term>Gene Expression Regulation, Plant</term>
<term>Gene Library</term>
<term>Oligonucleotide Array Sequence Analysis</term>
<term>Reverse Transcriptase Polymerase Chain Reaction</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Analyse de profil d'expression de gènes</term>
<term>Banque de gènes</term>
<term>Catastrophes</term>
<term>Chlorure de sodium</term>
<term>Climat désertique</term>
<term>Israël</term>
<term>RT-PCR</term>
<term>Régulation de l'expression des gènes végétaux</term>
<term>Séquençage par oligonucléotides en batterie</term>
<term>Étiquettes de séquences exprimées</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Israël</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en"><p><b>BACKGROUND</b>
</p>
<p>Plants growing in their natural habitat represent a valuable resource for elucidating mechanisms of acclimation to environmental constraints. Populus euphratica is a salt-tolerant tree species growing in saline semi-arid areas. To identify genes involved in abiotic stress responses under natural conditions we constructed several normalized and subtracted cDNA libraries from control, stress-exposed and desert-grown P. euphratica trees. In addition, we identified several metabolites in desert-grown P. euphratica trees.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>RESULTS</b>
</p>
<p>About 14,000 expressed sequence tag (EST) sequences were obtained with a good representation of genes putatively involved in resistance and tolerance to salt and other abiotic stresses. A P. euphratica DNA microarray with a uni-gene set of ESTs representing approximately 6,340 different genes was constructed. The microarray was used to study gene expression in adult P. euphratica trees growing in the desert canyon of Ein Avdat in Israel. In parallel, 22 selected metabolites were profiled in the same trees.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>CONCLUSION</b>
</p>
<p>Of the obtained ESTs, 98% were found in the sequenced P. trichocarpa genome and 74% in other Populus EST collections. This implies that the P. euphratica genome does not contain different genes per se, but that regulation of gene expression might be different and that P. euphratica expresses a different set of genes that contribute to adaptation to saline growth conditions. Also, all of the five measured amino acids show increased levels in trees growing in the more saline soil.</p>
</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">16356264</PMID>
<DateCompleted><Year>2006</Year>
<Month>07</Month>
<Day>24</Day>
</DateCompleted>
<DateRevised><Year>2018</Year>
<Month>11</Month>
<Day>13</Day>
</DateRevised>
<Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1474-760X</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>6</Volume>
<Issue>12</Issue>
<PubDate><Year>2005</Year>
</PubDate>
</JournalIssue>
<Title>Genome biology</Title>
<ISOAbbreviation>Genome Biol</ISOAbbreviation>
</Journal>
<ArticleTitle>Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert.</ArticleTitle>
<Pagination><MedlinePgn>R101</MedlinePgn>
</Pagination>
<Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Plants growing in their natural habitat represent a valuable resource for elucidating mechanisms of acclimation to environmental constraints. Populus euphratica is a salt-tolerant tree species growing in saline semi-arid areas. To identify genes involved in abiotic stress responses under natural conditions we constructed several normalized and subtracted cDNA libraries from control, stress-exposed and desert-grown P. euphratica trees. In addition, we identified several metabolites in desert-grown P. euphratica trees.</AbstractText>
<AbstractText Label="RESULTS" NlmCategory="RESULTS">About 14,000 expressed sequence tag (EST) sequences were obtained with a good representation of genes putatively involved in resistance and tolerance to salt and other abiotic stresses. A P. euphratica DNA microarray with a uni-gene set of ESTs representing approximately 6,340 different genes was constructed. The microarray was used to study gene expression in adult P. euphratica trees growing in the desert canyon of Ein Avdat in Israel. In parallel, 22 selected metabolites were profiled in the same trees.</AbstractText>
<AbstractText Label="CONCLUSION" NlmCategory="CONCLUSIONS">Of the obtained ESTs, 98% were found in the sequenced P. trichocarpa genome and 74% in other Populus EST collections. This implies that the P. euphratica genome does not contain different genes per se, but that regulation of gene expression might be different and that P. euphratica expresses a different set of genes that contribute to adaptation to saline growth conditions. Also, all of the five measured amino acids show increased levels in trees growing in the more saline soil.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Brosché</LastName>
<ForeName>Mikael</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>Plant Biology, Department of Biological and Environmental Sciences, University of Helsinki, P,O, Box 65, Viikinkaari 1, FIN-00014 Helsinki, Finland. Mikael.brosche@helsinki.fi</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Vinocur</LastName>
<ForeName>Basia</ForeName>
<Initials>B</Initials>
</Author>
<Author ValidYN="Y"><LastName>Alatalo</LastName>
<ForeName>Edward R</ForeName>
<Initials>ER</Initials>
</Author>
<Author ValidYN="Y"><LastName>Lamminmäki</LastName>
<ForeName>Airi</ForeName>
<Initials>A</Initials>
</Author>
<Author ValidYN="Y"><LastName>Teichmann</LastName>
<ForeName>Thomas</ForeName>
<Initials>T</Initials>
</Author>
<Author ValidYN="Y"><LastName>Ottow</LastName>
<ForeName>Eric A</ForeName>
<Initials>EA</Initials>
</Author>
<Author ValidYN="Y"><LastName>Djilianov</LastName>
<ForeName>Dimitar</ForeName>
<Initials>D</Initials>
</Author>
<Author ValidYN="Y"><LastName>Afif</LastName>
<ForeName>Dany</ForeName>
<Initials>D</Initials>
</Author>
<Author ValidYN="Y"><LastName>Bogeat-Triboulot</LastName>
<ForeName>Marie-Béatrice</ForeName>
<Initials>MB</Initials>
</Author>
<Author ValidYN="Y"><LastName>Altman</LastName>
<ForeName>Arie</ForeName>
<Initials>A</Initials>
</Author>
<Author ValidYN="Y"><LastName>Polle</LastName>
<ForeName>Andrea</ForeName>
<Initials>A</Initials>
</Author>
<Author ValidYN="Y"><LastName>Dreyer</LastName>
<ForeName>Erwin</ForeName>
<Initials>E</Initials>
</Author>
<Author ValidYN="Y"><LastName>Rudd</LastName>
<ForeName>Stephen</ForeName>
<Initials>S</Initials>
</Author>
<Author ValidYN="Y"><LastName>Paulin</LastName>
<ForeName>Lars</ForeName>
<Initials>L</Initials>
</Author>
<Author ValidYN="Y"><LastName>Auvinen</LastName>
<ForeName>Petri</ForeName>
<Initials>P</Initials>
</Author>
<Author ValidYN="Y"><LastName>Kangasjärvi</LastName>
<ForeName>Jaakko</ForeName>
<Initials>J</Initials>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2005</Year>
<Month>12</Month>
<Day>02</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>England</Country>
<MedlineTA>Genome Biol</MedlineTA>
<NlmUniqueID>100960660</NlmUniqueID>
<ISSNLinking>1474-7596</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D012333">RNA, Messenger</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>451W47IQ8X</RegistryNumber>
<NameOfSubstance UI="D012965">Sodium Chloride</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D003889" MajorTopicYN="Y">Desert Climate</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D004190" MajorTopicYN="N">Disasters</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020224" MajorTopicYN="N">Expressed Sequence Tags</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020869" MajorTopicYN="Y">Gene Expression Profiling</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018506" MajorTopicYN="Y">Gene Expression Regulation, Plant</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D015723" MajorTopicYN="N">Gene Library</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017343" MajorTopicYN="N">Genes, Plant</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018745" MajorTopicYN="N">Genome, Plant</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D007557" MajorTopicYN="N" Type="Geographic">Israel</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020411" MajorTopicYN="N">Oligonucleotide Array Sequence Analysis</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012333" MajorTopicYN="N">RNA, Messenger</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020133" MajorTopicYN="N">Reverse Transcriptase Polymerase Chain Reaction</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012965" MajorTopicYN="N">Sodium Chloride</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D014197" MajorTopicYN="N">Trees</DescriptorName>
<QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2005</Year>
<Month>05</Month>
<Day>27</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="revised"><Year>2005</Year>
<Month>07</Month>
<Day>22</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2005</Year>
<Month>11</Month>
<Day>02</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed"><Year>2005</Year>
<Month>12</Month>
<Day>17</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2006</Year>
<Month>7</Month>
<Day>25</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>2005</Year>
<Month>12</Month>
<Day>17</Day>
<Hour>9</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">16356264</ArticleId>
<ArticleId IdType="pii">gb-2005-6-12-r101</ArticleId>
<ArticleId IdType="doi">10.1186/gb-2005-6-12-r101</ArticleId>
<ArticleId IdType="pmc">PMC1414072</ArticleId>
</ArticleIdList>
<ReferenceList><Reference><Citation>Nucleic Acids Res. 1994 Mar 25;22(6):987-92</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8152931</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 1997 Oct;7(10):986-95</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9331369</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Int Conf Intell Syst Mol Biol. 1999;:138-48</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10786296</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Genet. 2000 May;25(1):25-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10802651</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2001 Feb;25(4):407-16</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11260497</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2002 Aug;31(3):279-92</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12164808</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2002 Aug;31(3):319-30</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12164811</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ann Bot. 2002 Dec;90(6):681-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12451023</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2002 Dec;130(4):2129-41</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12481097</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 2005 Apr;15(4):475-86</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15781570</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Curr Opin Biotechnol. 2005 Apr;16(2):123-32</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15831376</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2005 Aug;56(418):2003-10</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15967780</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2005 Dec;139(4):1762-72</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16299175</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2003 Feb;15(2):439-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12566583</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2003 Feb;131(2):430-42</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12586868</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2003 Feb;33(4):633-50</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12609038</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ann Bot. 2003 Apr;91(5):503-27</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12646496</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>FEBS Lett. 2003 May 8;542(1-3):37-41</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12729894</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2003 Aug;35(4):452-64</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12904208</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2003 Aug;132(4):2218-29</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12913176</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2003 Sep;133(1):84-99</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12970477</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Bioinformatics. 2002 Oct 25;3:31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12398795</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Planta. 2003 Nov;218(1):1-14</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14513379</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2004 Jan 1;32(Database issue):D115-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14681372</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Tree Physiol. 2004 Mar;24(3):265-76</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14704136</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Plant Sci. 2004 Jan;9(1):49-56</Citation>
<ArticleIdList><ArticleId IdType="pubmed">14729219</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Biol. 2004;5(4):R24</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15059257</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2004 Apr;38(2):366-79</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15078338</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2004 Apr;134(4):1683-96</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15047901</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Biol (Stuttg). 2004 Jan-Feb;6(1):55-64</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15095135</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2004 Jul;135(3):1447-56</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15220467</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2004 Jul;135(3):1718-37</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15247369</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2004 Jul;135(3):1697-709</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15247402</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Planta. 2004 Aug;219(4):694-704</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15146331</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Biochem Biophys Res Commun. 2004 Oct 8;323(1):72-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15351703</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Mol Biol. 2004 Mar;54(5):713-25</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15356390</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2004 Sep 21;101(38):13951-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15353603</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Gene. 1993 Jul 30;129(2):175-82</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8325504</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 1994 Jan 4;91(1):306-10</Citation>
<ArticleIdList><ArticleId IdType="pubmed">8278383</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 1998 Oct 27;95(22):13330-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9789088</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Methods Enzymol. 1999;303:349-80</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10349654</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 1999 Nov 1;27(21):e31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10518626</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2004 Dec;136(4):4159-68</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15557093</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Planta. 2004 Oct;219(6):936-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15605173</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nucleic Acids Res. 2005 Jan 1;33(Database issue):D622-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15608275</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2005 Jan;56(410):297-307</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15596477</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
<affiliations><list><country><li>Finlande</li>
</country>
<region><li>Uusimaa</li>
</region>
<settlement><li>Helsinki</li>
</settlement>
<orgName><li>Université d'Helsinki</li>
</orgName>
</list>
<tree><noCountry><name sortKey="Afif, Dany" sort="Afif, Dany" uniqKey="Afif D" first="Dany" last="Afif">Dany Afif</name>
<name sortKey="Alatalo, Edward R" sort="Alatalo, Edward R" uniqKey="Alatalo E" first="Edward R" last="Alatalo">Edward R. Alatalo</name>
<name sortKey="Altman, Arie" sort="Altman, Arie" uniqKey="Altman A" first="Arie" last="Altman">Arie Altman</name>
<name sortKey="Auvinen, Petri" sort="Auvinen, Petri" uniqKey="Auvinen P" first="Petri" last="Auvinen">Petri Auvinen</name>
<name sortKey="Bogeat Triboulot, Marie Beatrice" sort="Bogeat Triboulot, Marie Beatrice" uniqKey="Bogeat Triboulot M" first="Marie-Béatrice" last="Bogeat-Triboulot">Marie-Béatrice Bogeat-Triboulot</name>
<name sortKey="Djilianov, Dimitar" sort="Djilianov, Dimitar" uniqKey="Djilianov D" first="Dimitar" last="Djilianov">Dimitar Djilianov</name>
<name sortKey="Dreyer, Erwin" sort="Dreyer, Erwin" uniqKey="Dreyer E" first="Erwin" last="Dreyer">Erwin Dreyer</name>
<name sortKey="Kangasj Rvi, Jaakko" sort="Kangasj Rvi, Jaakko" uniqKey="Kangasj Rvi J" first="Jaakko" last="Kangasj Rvi">Jaakko Kangasj Rvi</name>
<name sortKey="Lamminm Ki, Airi" sort="Lamminm Ki, Airi" uniqKey="Lamminm Ki A" first="Airi" last="Lamminm Ki">Airi Lamminm Ki</name>
<name sortKey="Ottow, Eric A" sort="Ottow, Eric A" uniqKey="Ottow E" first="Eric A" last="Ottow">Eric A. Ottow</name>
<name sortKey="Paulin, Lars" sort="Paulin, Lars" uniqKey="Paulin L" first="Lars" last="Paulin">Lars Paulin</name>
<name sortKey="Polle, Andrea" sort="Polle, Andrea" uniqKey="Polle A" first="Andrea" last="Polle">Andrea Polle</name>
<name sortKey="Rudd, Stephen" sort="Rudd, Stephen" uniqKey="Rudd S" first="Stephen" last="Rudd">Stephen Rudd</name>
<name sortKey="Teichmann, Thomas" sort="Teichmann, Thomas" uniqKey="Teichmann T" first="Thomas" last="Teichmann">Thomas Teichmann</name>
<name sortKey="Vinocur, Basia" sort="Vinocur, Basia" uniqKey="Vinocur B" first="Basia" last="Vinocur">Basia Vinocur</name>
</noCountry>
<country name="Finlande"><region name="Uusimaa"><name sortKey="Brosche, Mikael" sort="Brosche, Mikael" uniqKey="Brosche M" first="Mikael" last="Brosché">Mikael Brosché</name>
</region>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Exploration

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 004035 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 004035 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    PoplarV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:16356264
   |texte=   Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:16356264" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a PoplarV1

This area was generated with Dilib version V0.6.37.
Data generation: Wed Nov 18 12:07:19 2020. Site generation: Wed Nov 18 12:16:31 2020

	Serveur d'exploration sur le peuplier
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration sur le peuplier

Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert.

Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert.

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki